【2018】メタゲノム解析のレビュー

review of methods and databases for metagenomic classification and assembly | Briefings in Bioinformatics | Oxford Academic

まとまっていて分かりやすい。(Briefings in Bioinformatics)

Best practices for analysing microbiomes | Nature Reviews Microbiology

Rob Knight氏のレビュー、一部でFig 2.のDeblur推しが話題になっていた模様・・・(Nature Reviews Microbiology)

This is unfair to DADA2 😐 When someone as big as Rob Knight says "this is the best practice", it creates a nightmare for younger scientists to promote their tool.

I think, from "Deblur" to "Deblur or DADA2" would've added much more than just 9 more characters to this chart. pic.twitter.com/5q71yxh4Yt

— A. Murat Eren (Meren) (@merenbey) 2018年5月23日

Identifying and Overcoming Threats to Reproducibility, Replicability, Robustness, and Generalizability in Microbiome Research

Mothurの著者による、Microbiome researchのreproducibility(再現性)についての総説 (ASM)。